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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114668330
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGREEGDQAP RVELSAQPRG IMGFVVRLVK LGVAGGRRGS ALSPDLVGEW AGSQAWPRRG  60
   61 RGSDARPQRE EMREERAASP LSPAWEEPAG VSGGPGPLPA CTTRGLALGT STLSPQAECP 120
  121 GLLLLQGLGV GYTRGTRVWG RMLSAGAALM CGLYLGSLPP SPPTSLTCLA FACLVASAAA 180
  181 EARAAGHAAR RGRASAAAPL SAPAPSRPRP GFLSLGGAAG SARRGGGAAP PPVGRACAAS 240
  241 CRSGWEPRRG RREEPREAAG RRGAEGARGR AGRRARRVPG QPRGGRLAGR AEPRRGLAGA 300
  301 GPGSRGRRRR PGPPPAPPTL AQRAAAASPL RMSRKGPRAE VCADCSAPDP GWASISRGVL 360
  361 VCDECCSVHR SLGRHISIVK HLRHSAWPPT LLQMVHTLAS NGANSIWEHS LLDPAQVQSG 420
  421 RRKANPQDKV HPIKSEFIRA KYQMLAFVHK LPCRDDDGVT AKDLSKQLHS SVRTGNLETC 480
  481 LRLLSLGAQA NFFHPEKGTT PLHVAAKAGQ TLQAELLVVY GADPGSPDVN GRTPIDYARQ 540
  541 AGHHELAERL VECQYELTDR LAFYLCGRKP DHKNGHYIIP QMADRSRQKC MSQSLDLSEL 600
  601 AKAAKKKLQA LSNRLFEELA MDVYDEVDRR ENDAVWLATQ NHSTLVTERS AVPFLPVNPE 660
  661 YSATRNQGRQ KLARFNAREF ATLIIDILSE AKRRQQGKSL SSPTDNLELS LRSQSDLDDQ 720
  721 HDYDSVASDE DTDQEPLRST GATRSNRARS MDSSDLSDGA VTLQEYLELK KALATSEAKV 780
  781 QQLMKVNSSL SDELRRLQRE IHKLQAENLQ LRQPPGPVPT PPLPTERAEH TPMAPGGSTH 840
  841 RRDRQAFSMY EPGSALKPFG GPPGDELTTR LQPFHSTELE DDAIYSVHVP AGLYRIRKGV 900
  901 SASAVPFTPS SPLLSCSQEG SRHTSKLSRH GSGADSDYEN TQSGDPLLGL EGKRFLELGK 960
  961 EEDFHPELES LDGDLDPGLP STEDVILKTE QVTKNIQELL RAAQEFKHDS FVPCSEKIHL1020
 1021 AVTEMASLFP KRPALEPVRS SLRLLNASAY RLQSECRKTV PPEPGAPVDF QLLTQQVIQC1080
 1081 AYDIAKAAKQ LVTITTREKK Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle