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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114668496
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAGAAATD LEVARGKRAA LFFAAVAIVL GLPLWWKTTE TYRASLPYSQ ISGLNALQLR  60
   61 LMVPVTVVFT RESVPLDDQE KLPFTVVHER EIPLKYKMKI KCRFQKAYRR ALDHEEEALS 120
  121 SGSVQEAEAM LDEPQEQAEG SLTVYVISEH SSLLPQDMMS YIGPKRTAVV RGIMHREAFN 180
  181 IIGRRIVQVA QAMSLTEDVL AAALADHLPE DKWSAEKRRP LKSSLGYEIT FSLLNPDPKS 240
  241 HDVHWDIEGA VRRYVQPFLN ALSAAGNFSV DSQILYYAML GVNPRFDSAS SSYYLDMHSL 300
  301 PHVINPVESR LGSSAASLYP VLNFLLYVPE LAHSPLYIQD KDGAPVATNA FHSPRWGGIM 360
  361 VYNVDSKTYN ASVLPVRVEV DMVRVMEVFL AQLRLLFGIA QPQVPPKCLL SGPTSEGLMT 420
  421 WELDRLLWAR SVENLATATT TLTSLAQLLG KISNIVIKDD VASEVYKAVA AVQKSAEELA 480
  481 SGHLASAFVA SQEAVTSSEL AFFDPSLLHL LYFPDDQKFA IYIPLFLPMA VPILLSLVKI 540
  541 FLETHKSWRK PEKTD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle