YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114666484
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGDYVQYSQ GSAHAEGPRP RALAHSRADN DPVYIFTVTG AGRAVTAVVS QSPCSGLEAA  60
   61 FLLSGGDLRA PSSGLLTPAP RAPEGPGSPS RRRGAAPGGL AELGRGGPGA GGAGVIGMMR 120
  121 TQCLLGLRTF VAFAAKLWSF FIYLLRRQIR TVIQYQTVRY DILPLSPVSR NRLAQVKRKI 180
  181 LVLDLDETLI HSHHDGVLRP TVRPGTPPDF ILKVVIDKHP VRFFVHKRPH VDFFLEVVSQ 240
  241 WYELVVFTAS MEIYGSAVAD KLDNSRSILK RRYYRQHCTL ELGSYIKDLS VVHSDLSSIV 300
  301 ILDNSPGAYR SHPDNAIPIK SWFSDPSDTA LLNLLPMLDA LRFTADVRSV LSRNLHQHRL 360
  361

Type	Start	End	Confidence
Cytoplasmic	1	123	0.70
Transmembrane Helix	124	144	0.71
Non-Cytoplasmic	145	360	0.84