YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114665972
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYQSLRLEY LQIPPVSRAY TTACVLTTAA VQLELITPFQ LYFNPELIFK HFQIWRLITN  60
   61 FLFFGPVGFN FLFNMIFLYR YCRMLEEGSF RGRTADFVFM FLFGGFLMTQ SDRMSKSKEL 120
  121 LTQAFTIMLV YVWSRRNPYV RMNFFGLLNF QAPFLPWVLM GFSLLLGNSI IVDLLGIAVG 180
  181 HIYFFLEDVF PNQPGGIRIL KTPSILKAIF DTPDEDPNYN PLPEERPGGF AWGEGQRLGG 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	18	0.87
Transmembrane Helix	19	39	0.80
Non-Cytoplasmic	40	56	0.78
Transmembrane Helix	57	79	0.88
Cytoplasmic	80	91	0.73
Transmembrane Helix	92	110	0.84
Non-Cytoplasmic	111	119	0.66
Transmembrane Helix	120	134	0.62
Cytoplasmic	135	153	0.44
Transmembrane Helix	154	185	0.74
Non-Cytoplasmic	186	240	0.49