YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114663232
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRTPLSASA HRLLLPGSRG RPPRNMQPTG REGSRALSRR YLRRLLLLLL LLLLRQPVTR  60
   61 AETTPGAPRA LSTLGSPSLF TTPGVPSALT TPGLTTPGTP KTLDLRGRAQ ALMRSFPLVD 120
  121 GHNDLPQVLR QRYKNVLQDV NLRNFSHGQT SLDRLRDGLV GAQFWSASVS CQSQDQTAVR 180
  181 LALEQIDLIR RMCASYSELE LVTSAEGLNS SQKLACLIGV EGGHSLDSSL SVLRSFYVLG 240
  241 VRYLTLTFTC STPWAESSTK FRHHMYTNVS GLTSFGEKVV EELNRLGMMI DLSYASDTLM 300
  301 RRVLEVSQAP VIFSHSAARA VCDNLLVNPP PSLKLKKNGG IVMVTLSMGV LQCNLLANVS 360
  361 TVADHFDHIR AVIGSEFIGI GGNYDGTGRF PQGLEDVSTY PVLIEELLSR SWSEEELQGV 420
  421 LRGNLLRVFR QVEKVREESR AQSPVEAEFP YGQLSTSCHS HLVPQNGHQA THLEVTKQPT 480
  481 NRVPWRSSNA SPYLVPGLVA AATFPTFTQW LC

Type	Start	End	Confidence
Signal Peptide	1	61	0.99
N-region	1	52
H-region	53	58
C-region	59	61
Cleavage Site	61	62
Non-Cytoplasmic	62	512	0.97