YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MTX1
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPMELFCW SGGWGLPSVD LDSLAVLTYA RFTGAPLKVH KISNPWQSPS GTLPALRTSH  60
   61 GEVISVPHKI ITHLRKEKYN ADYDLSARQG ADTLAFMSLL EEKLLPVLVH TFWIDTKNYV 120
  121 EVTRKWYAEA MPFPLNFFLP GRMQRQYMER LQLLTGEHRP EDEEELEKEL YREARECLTL 180
  181 LSQRLGSQKF FFGDAPASLD AFVFSYLALL LQAKLPSGKL QVHLRGLHNL CAYCTHILSL 240
  241 YFPWDGAEVP PQRQTPAGPE TEEEPYRRRN QILSVLAGLA AMVGYALLSG IVSIQRATPA 300
  301 RAPGTRTLGM AEEDEEE

Type	Start	End	Confidence
Non-Cytoplasmic	1	271	0.66
Transmembrane Helix	272	294	0.85
Cytoplasmic	295	317	0.58