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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114658838
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGFYISKS LGILGILLGV AAVCTIIALS VVYSQEKNKN ANSSPVASTT PSASATTNPA  60
   61 SATTLDQSKA WNRYRLPNTL KPDSYQVTLR PYLTPNDRGL YVFKGSSTVR FTCKEATDVI 120
  121 IIHSKKLNYT LSQGHRVVLR GVGGSQPPDI DRTELVEPTE YLVVHLKGSL VKDSQYEMDS 180
  181 EFEGELADDL AGFYRSEYME GNVRKVVATT QMQAADARKS FPCFDEPAMK AEFNITLIHP 240
  241 KDLTALSNML PKGPSTPLPE DPNWSVTEFH TTPKMSTYLL AFIVSEFDYV EKQASNGVLI 300
  301 RIWARPSAIA VGHGDYALNV TGPILNFFAG HYDTPYPLPK SDQIGLPDFN AGAMENWGLV 360
  361 TYRENSLLFD PLSSSSSNKE RVVTVIAHEL AHQWFGNLVT IEWWNDLWLN EGFASYVEYL 420
  421 GADYAEPTWN LKDLMVLNDV YRVMAVDALA SSHPLSTPSS EINTPAQISE LFDAISYSKG 480
  481 ASVLRMLSSF LSEDVFKQGL ASYLHTFAYQ NTIYLNLWDH LQEAVNNRSI QLPTTVRDIM 540
  541 NRWTLQMGFP VITVDTSTGT LSQEHFLLDP DSNVTRPSEF NYVWIVPITS IRDGKQQQDY 600
  601 WLMDVRAQNN LFSTSGNEWV LLNLNVTGYY QVNYDEENWR KIQTQLQTDH SAIPVINRAQ 660
  661 IINDAFNLAS AHKVPVTLAL NNTLFLIEER EYMPWEAALS SLSYFKLMFD RSEVYGPMKN 720
  721 YLKKQVTPLF IHFRNNTNNW REIPENLMDQ YNEVNAISTA CSNGVPECEE MVSGLFKQWM 780
  781 ENPNNNPIHP NLRSTVYCNA IAQGGEEEWD FAWEQFRNAT LVNEADKLRA ALACSKELWI 840
  841 LNRYLSYTLN RDLIRKQDAT FTIISITNNV IGQGLVWDFV QSNWKKLFND YGGGSFSFSN 900
  901 LIQGVTRRFS TEYELQQLEQ FKKDNEETGF GSGTRALEQA LEKTKANIKW VKENKEVVLQ 960
  961 WFTENSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle