YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114658725
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPVRRTLL GVAGGWRRFE RLWAGSLSSR SLALAAAPSS NGSPWRLLGA LCLQRPPVVS  60
   61 KPLTPLQEEM ASLLQQIEIE RSLYSDHELR ALDENQRLAK KKADLYDEED EQDILLAQDL 120
  121 EDMWEQKFLQ FKLGARITEA DEKNDRTSLN RKLDRNLVLL VREKFGDQDV WILPQAEWQP 180
  181 GETLRGTAER TLATLSENSM EAKFLGNAPC GHYTFKFPQA VRTESNLGAK VFFFKALLLT 240
  241 GDFSQAGNKG HHVWVTKDEL GDYLKPKYLA QVRRFLSDL

Type	Start	End	Confidence
Signal Peptide	1	42	0.84
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	279	0.99