YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114658435
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELAVPSSL LEPAPALVLC LQNGTTVLSQ YRQLLEWTPS SGPSCPILSL TPSLTFFFPS  60
   61 SLFVHPMPLL QELSVTFVPH PRPSDYPHKV SLGSAFLDRS SEPPGSNPAP ATSRSFQGPV 120
  121 QPHPAQILEL IQSTPLDPQF VLSPDKGLAP SCTRNAEDPQ LVDSRRSAQA GVDGAGCGCP 180
  181 EGGGGPPVGE RVPAPLEAEA QLGWELSAYR ARSAGRKAPV SALRAQSVPA APPLSVPAAA 240
  241 ATATMPNFAG TWKMRSSENF DELLKALGVN AMLRKVAVAA ASKPHVEIRQ DGDQFYIKTS 300
  301 TTVRTTEINF KVGEGFEEET VDGRKCRSLA TWENENKIHC TQTLLEGDGP KTYWTRELAN 360
  361 DELILTFGAD DVVCTRIYVR E

Type	Start	End	Confidence
Signal Peptide	1	29	0.58
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	381	0.97