YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114656884
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLCPRPAL CYHFLLSLLR SAMQNARGAR QRAEAAVLSG PGPPLGRAAQ YGIPRPLSSA  60
   61 GRLSQGCRGA STVGAAGWKG ELPKAGGCPA PGPETPAISP SKRARPAEEG SMQLRFARLS 120
  121 EHATAPTRGS ARAAGYDLYS AYDYTIPPME KAVVKTDIQI ALPSGCYGRV APRSGLAAKH 180
  181 FIDVGAGVID EDYRGNVGVV LFNFGKEKFE VKKGDRIAQL ICERIFYPEI EEVQDLDDTE 240
  241 RGSGGFGSTG KN

Type	Start	End	Confidence
Signal Peptide	1	28	0.92
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	252	0.99