YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114656164
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAQGGLVAN REPAHSSGPL ELSALGGGSR GRSDRGSGQG DSLYPVGYLD KQVPDTSVQE  60
   61 TDRILVEKRC WDIALGPLKQ IPMNLFIMYM AGNTISIFPT MMVCMMAWRP IQALMAISAT 120
  121 FKMLESSSQK FLQGLVYLIG NLMGLALAVY KCQSMGLLPT HASDWLAFIE PPERMEFSGG 180
  181 GLLL

Type	Start	End	Confidence
Cytoplasmic	1	84	0.73
Transmembrane Helix	85	109	0.85
Non-Cytoplasmic	110	130	0.63
Transmembrane Helix	131	152	0.83
Cytoplasmic	153	184	0.67