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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114654128
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFLQKIQTQ PSIFPSAKKD VVVKAGIPIK DSNCHGFRCF DETRCVAFWP STCAFILFEN  60
   61 SLYLRGLQLS ISLLWLNQEK RRYGNNASSP QSASGIKVPS FIRLFMMETF VERLGCAGPG 120
  121 LDGLQQTAQA QEWLKFPGLA SRQRILPALG SSLHEGAGKE GGNHALLPVL TPAPARLSRN 180
  181 DSVPTLTALQ SSCDPYQGRP RGNLAILRAT FWPPPEVKVH LLPGAEPEMI ATFSQASPTP 240
  241 DLDAASNQVP GPGVPLEKPP LHRRGALLSS VIGQEAAWGP PPSLPDWPAR ELAAALQPFP 300
  301 VSGRWVGCGA GLGAAAAAAT AYRACLAPAA ARKMRPEPGG CCCRRTVRAN GCVANGEVRN 360
  361 GYVRSSAAAA AAAGQIHHVT QNGGLYKRPF NEAFEETPML VAVLTYVGYG VLTLFGYLRD 420
  421 FLRYWRIEKC HHATEREEQK DFVSLYQDFE NFYTRNLYMR IRDNWNRPIC SVPGARVDIM 480
  481 ERQSHDYNWS FKYTGNIIKG VINMGSYNYL GFARNTGSCQ EAAAKVLEEY GAGVCSTRQE 540
  541 IGNLDKHEEL EELVARFLGV EAAMAYGMGF ATNSMNIPAL VGKGCLILSD ELNHASLVLG 600
  601 ARLSGATIRI FKHNNMQSLE KLLKDAIVYG QPRTRRPWKK ILILVEGIYS MEGSIVRLPE 660
  661 VIALKKKYKA YLYLDEAHSI GALGPTGRGV VEYFGLDPED VDVMMGTFTK SFGASGGYIG 720
  721 GKKELIDYLR THSHSAVYAT SLSPPVVEQI ITSMKCIMGQ DGTSLGKECV QQLAENTRYF 780
  781 RRRLKEMGFI IYGNEDSPVV PLMLYMPAKI GAFGREMLKR NIGVVVVGFP ATPIIESRAR 840
  841 FCLSAAHTKE ILDTALKEID EVGDLLQLKY SRHRLVPLLD RPFDETTYEE TED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle