YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114653860
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLGCELGIG FLFGGVAYGT SFSRRRLATS RDMGWKMASP TDGTDLEASL LSFEKLDRAS  60
   61 PDLWPEQLPG VAEFAASFKS PITSSPPKWM AEIERDDIDM LKELGSLTTA NLMEKVRGLQ 120
  121 NLAYQLGLDE WSPSVTQAGV QWCDLGSLQP LPPGLKQVPH LSFPSSWDYS QRDDTGEIPQ 180
  181 YSREAQEVAA ACGQDVLGSE TKLPSRCTSN NAHLTACLGE ARGCTSRTAL SPAPGTLHF

Type	Start	End	Confidence
Signal Peptide	1	19	0.43
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	239	0.81