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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114653489
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHRVCRGRS GQGRRRSSVI RWPVPKHVGW VVLLGCGGSG TSILVVSIVG SGLIKAMAPA  60
   61 EILNGKEISA QIRARLKNQV TQLKEQVPGF TPRLAILQVG NRDDSNLYIN VKLKAAEEIG 120
  121 IKATHIKLPR TTTESEVMKY ITSLNEDSTV HGFLVQLPLD SENSINTEEV INAIAPEKDV 180
  181 DGLTSINAGK LARGDLNDCF IPCTPKGCLE LIKETGVPIA GRHAVVVGRS KIVGAPMHDL 240
  241 LLWNNATVTT CHSKTANLDE EVNKGDILVV ATGQPEMVKG EWIKPGAIVI DCGINYVPDD 300
  301 KKPNGRKVVG DVAYDEAKER ASFITPVPGG VGPMTVAMLM QSTVESAKRF LEKFKPGKWM 360
  361 IQYNNLNLKT PVPSDIDISR SCKPKPIGKL AREIGLLSEE VELYGETKAK VLLSALERLK 420
  421 HRPDGKYVVV TGITPTPLGE GKSTTTIGLV QALGAHLYQN VFACVRQPSQ GPTFGIKGGA 480
  481 AGGGYSQVIP MEEFNLHLTG DIHAITAANN LVAAAIDARI FHELTQTDKA LFNRLVPSVD 540
  541 GVRRFSDIQI RRLKRLGIEK TDPTTLTDEE INRFARLDID PETITWQRVL DTNDRFLRKI 600
  601 TIGQAPTEKG HTRTAQFDIS VASEIMAVLA LTTSLEDMRE RLGKMVVASS KKGEPVSAED 660
  661 LGVSGALTVL MKDAIKPNLM QTLEGTPVFV HAGPFANIAH GNSSIIADRI ALKLVGPEGF 720
  721 VVTEAGFGAD IGMEKFFNIK CRYSGLCPHV VVLVATVRAL KMHGGGPTVT AGLPLPKAYI 780
  781 QENLELVEKG FSNLKKQIEN ARMFGIPVVV AVNAFKTDTE SELDLISRLS REHGAFDAVK 840
  841 CTHWAEGGKG ALALAQAVQR AAQAPSSFQL LYDLKLPVED KIRIIAQKIY GADDIELLPE 900
  901 AQHKAEVYTK QGFGNLPICM AKTHLSLSHN PEQKGVPTGF ILPIRDIRAS VGAGFLYPLV 960
  961 GTITIHLQEA TLKVWPVSIQ AHWELGSISK PREVNPCPED LKLIVGVSPE VIFSLNSHHV1020
 1021 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle