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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114652488
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPPVLRPP SPLLPVAAAA AAAAAALVPG SGPGPAPFLA PVAAPVGGIS FHLQIGLSRE  60
   61 PVLLLQDSSG DYSLAHVREM ACSIVDQKFP ECGFYGMYDK ILLFRHDPTS ENILQLVKTA 120
  121 SDIQEGDLIE VVLSASATFE DFQIRPHALF VHSYRAPAFC DHCGEMLWGL VRQGLKCEGC 180
  181 GLNYHKRCAF KIPNNCSGVR RRRLSNVSLT GVSTIRTSSA ELSTSAPDEP LLSPVSPGFE 240
  241 QKSPSESFIG REKRSNSQSY IGRPIHLDKI LMSKVKVPHT FVIHSYTRPT VCQYCKKLLK 300
  301 GLFRQGLQCK DCRFNCHKRC APKVPNNCLG EVTINGDLLS PGAESDVVME EGSDDNDSER 360
  361 NSGLMDDMEE AMVQDAEMAM AECQNDSGEM QDPDPDHEDA NRTISPSTSN NIPLMRVVQS 420
  421 VKHTKRKSST VMKEGWMVHY TSKDTLRKRH YWRLDSKCIT LFQNDTGSRY YKEIPLSEIL 480
  481 SLEPAKTSAL IPNGANPHCF EITTANVVYY VGENVVNPSS PPPNNSVLTS GVGADVARMW 540
  541 EIAIQHALMP VIPKGSSVGT GTNLHRDISV SISVSNCQIQ ENVDISTVYQ IFPDEVLGSG 600
  601 QFGIVYGGKH RKTGRDVAIK IIDKLRFPTK QESQLRNEVA ILQNLHHPGV VNLECMFETP 660
  661 ERVFVVMEKL HGDMLEMILS SEKGRLPEHI TKFLITQILV ALRHLHFKNI VHCDLKPENV 720
  721 LLASADPFPQ VKLCDFGFAR IIGEKSFRRS VVGTPAYLAP EVLRNKGYNR SLDMWSVGVI 780
  781 IYVSLSGTFP FNEDEDIHDQ IQNAAFMYPP NPWKEISHEA IDLINNLLQV KMRKRYSVDK 840
  841 TLSHPWLQDY QTWLDLRELE CKIGERYITH ESDDLRWEQY AGEQGLQYPA HLINPSASHS 900
  901 DTPETEETEM KALGERVSIL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle