YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114648995, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIWWFLLAI EICTGNINSQ DTCRQGHPGI PGNPGHNGLP GRDGRDGAKG DKGDAGEPGR  60
   61 PGSPGKDGTS GEKGERGADG KVEAKGIKGD QGSRGSPGKH GPKGLAGPMG EKGLQGETGP 120
  121 QGQKGNKGDV GPTGPEGPRG NIGPLGPAGL PGPMGPIGKP GPKGEAGPTG PQGEPGVRGI 180
  181 RGWKGDRGEK GKIGETLVLP KSAFTVGLTV LSKFPSSDVP IKFDKILYNE FNHYDTAAGK 240
  241 FTCHIAGVYY FTYHITVFSR NVQVSLVKNR VKILHTKDAY MSSEDQASGG IVLQLKLGDE 300
  301 VWLQVTGGER FNGLFADEDD DTTFTGFLLF SSP

Type	Start	End	Confidence
Signal Peptide	1	15	0.56
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	333	0.99