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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114647673
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPRPIRKEA GILLQLIRAT WHGADQGNGA LTCLPPPHWA QASSGERTYI HRGGLLSGEA  60
   61 ITEALIVHQV GLTAAHGTEA VAHSRGSEPD DKVPTLTSAQ GPGSMQLAAT VEDTLAHHVL 120
  121 HLQGLRQGSQ HYHSGSPAPG PGPAWPRPVD DDGLAPVSYN LAFSTHPPPT SRMRLWKAVV 180
  181 VTLAFMSVDI CVTTAIYVFS HLDRSLLEDI RHFNIFDSVL DLWAACLYRS CLLLGATIGV 240
  241 AKNSALGPRR LRASWLVITL VCLFVGIYAM VKLLLFSEVR RPIRDPWFWA LFVWTYISLG 300
  301 ASFLLWWLLS TVRPGTQALE PGAATEAEGF PGSGRPPPEQ ASGATLQKLL SYTKPDVAFL 360
  361 VAASFFLIVA ALGETFLPYY TGRAIDGIVI QKSMDQFSTA VVIVCLLAIG SSFAAGIRGG 420
  421 IFTLIFARLN IRLRNCLFRS LVSQETSFFD ENRTGDLISR LTSDTTMVSD LVSQNINVFL 480
  481 RNTVKVTGVV VFMFSLSWQL SLVTFMGFPI IMMVSNIYGK YYKRLSKEVQ NALARASNTA 540
  541 EETISAMKTV RSFANEEEEA EVYLRKLQQV YKLNRKEAAA YMYYVWGSGL TLLVVQVSIL 600
  601 YYGGHLVISG QMTSGNLIAF IIYEFVLGDC MESVGSVYSG LMQGVGAAEK VFEFIDRQPT 660
  661 MVHDGSLAPD HLEGRVDFEN VTFTYRTRPH TQVLQNVSFS LSPGKVTALV GPSGSGKSSC 720
  721 VNILENFYPL EGGRVLLDGK PISAYDHKYL HRVISLVSQE PVLFARSITD NISYGLPTVP 780
  781 FEMVVEAAQK ANAHGFIMEL QDGYSTETGE KGAQLSGGQK QRVAMARALV RNPPVLILDE 840
  841 ATSALDAESE YLIQQAIHGN LQKHTVLIIA HRLSTVEHAH LIVVLDKGRV VQQGTHQQLL 900
  901 AQGGLYAKLV QRQMLGLQPA ADFTAGHNEP VANGSHKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle