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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114647758
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGSCVFRRQ RQAFTLDSAA TRPPQLPPQN GSEAVGAAAA WRGLSWRPWP RPLPVRSALR  60
   61 PVPAPGPLRP RPCRRNPEAQ GCSGAVRRRR RWGIKPLATC RAAPACAAVP DPPCLCGLRA 120
  121 RSPRLCRLCP RPRLLPGAEP CEPRVGPRRA DMGCSAKARW AAGALGVAGL LCAVLGAVMI 180
  181 VMVPSLIKQQ VLKNVRIDPS SLSFNMWKEI PIPFYLSVYF FDVMNPSEIL KGEKPQVRER 240
  241 GPYVYREFRH KSNITFNNND TVSFLEYRTF QFQPSKSHGS ESDYIVMPNI LVLGAAVMME 300
  301 NKPMTLKLIM TLAFTTLGER AFMNRTVGEI MWGYKDPLVN LINKYFPGMF PFKDKFGLFA 360
  361 ELNNSDSGLF TVFTGVQNIS RIHLVDKWNG LSKVDFWHSD QCNMINGTSG QMWPPFMTPE 420
  421 SSLEFYSPEA CRSMKLMYKE SGVFEGIPTY RFVAPKTLFA NGSIYPPNEG FCPCLESGIQ 480
  481 NVSTCRFSAP LFLSHPHFLN ADPVLAEAVT GLHPNQEAHS LFLDIHPVTG IPMNCSVKLQ 540
  541 LSLYMKSVAG IGQTGKIEPV VLPLLWFAES GAMEGETLHT FYTQLVLMPK VMHYAQYVLL 600
  601 ALGCVLLLVP VICQIRSQGP EDTVSQPGLA AGPDRPPSPY TPLLPDSPSG QPPSPTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle