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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114646636
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAFGHGGG LAFPAAPAVA GAMSPAGPRE RRRGRGRKSR AVTVAGVRPS SPHGLVGVVS  60
   61 VGGAGVMAVE TLSPDWEFDR VDDGSQKIHA EVQLKNYGKF LEEYTSQLRR IEDALDDSIG 120
  121 DVWDFNLDPI ALKLLPYEQS SLLELIKTEN KVLNKVITVY AALCCEIKKL KYEAETKFYN 180
  181 GLLFYGEGAT DASMVEGDCQ IQMGRFISFL QELSCFVMRC YEVVMNVVHQ LAALYISNKI 240
  241 APKIIETTGV HFQTMYEHLG ELLTVLLTLD EIIDNHITLK DHWTMYKRLL KSVHHNPSKF 300
  301 GIQEEKLKPF EKFLLKLEGQ LLDGMIFQAC IEQQFDSLNG GVSVSKNSTF AEEFAHSIRS 360
  361 IFANVEAKLG EPSEIDQRDK YVGICGLFVL HFQIFRTIDK KFYKSLLDIC KKVPAITLTA 420
  421 NIIWFPDNFL IQKIPAAAKL LDRKSLQAIK IHRDTFLQQK AQSLTKDVQS YYVFVSSWMM 480
  481 KMESILSKEQ RMDKFAEDLT NRCNVFIQGF LYAYSISTII KTTMNLYMSM QKPMTKTSVK 540
  541 ALCRLVELLK AIEHMFYRRS MVVADSVSHI TQHLQHQALH SISVAKKRVI SDKKYSEQRL 600
  601 DVLSALVLAE NTLNGPSTKQ RRLIVSLALS VGTQMKTFKD EELFPLQVVM KKLDLISELR 660
  661 ERVQTQCDCC FLYWHRAVFP IYLDDVYENA VDAARLHYMF SALRDCVPAM MHARHLESYE 720
  721 ILLDCYDKEI MEILNEHLLD KLCKEIEKDL RLSVHTHLKL DDRNPFKVGM KDLALFFSLN 780
  781 PIRFFNRFID IRAYVTHYLD KTFYNLTTVA LHDWATYSEM RNLATQRYGL VMTEAHLPSQ 840
  841 TLEQGLDVLE IMRNIHIFVS RYLYNLNNQI FIERTSNNKH LNTINIRHIA NSIRTHGTGI 900
  901 MNTTVNFTYQ FLKKKFYIFS QFMYDEHIKS RLIKDIRFFR EIKDQNDHKY PFDRAEKFNR 960
  961 GIRKLGITPE GQSYLDQFRQ LISQIGNAMG YVRMIRSGGL HCSSNAIRFV PDLEDIVNFE1020
 1021 ELVKEEGLAE ETLKAARHLD SVLSDHTRNS AEGTEYFKML VDVFAPEFRR PKNIHLRNFY1080
 1081 IIVPPLTLNF VEHSISCKEK LNKKNKIGAA FTDDGFAMGV AYILKLLDQY REFDSLHWFQ1140
 1141 SVREKYLKEI RAVAKQQNVQ SASQDEKLLQ TMNLTQKRLD VYLQEFELLY FSLSSARIFF1200
 1201 RADKTAAEEN QEKKEKEEET KTSNGDLSDS TVSADPVVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle