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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114644171
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPAQVAGG RGDGRRKQSV SGRRSRESGS RSSPWPQAGR LEGEELPPFF GIRTHHDGCD  60
   61 LRPSGSPGVM AQKHPGERGL YGAHHSGGAS LRTLGPSVDP EIPSFSGLRD SAGTAPNGTR 120
  121 CLTEHSGPKH TQHPNPAHWL DPSHGPPGGP GPPRDAEDPD QSETSSEEES GVDQELSKEN 180
  181 ETGNQKDGNS FLSIPSACNC RGTPGIPEGP YSEGGNGSSS NFCHHCTSPA LGEDELEEEY 240
  241 DDEESLKFPS DFSRVSSGKK PPSRRQRHRF PTKEDTREGG RRDPRSPGRH RLGRKRSQAD 300
  301 KRKGLGLWGA EELCQLGQAG FWWLIELLVL VGEYVETCGH LIYACRQLKS SDLDLFRVWM 360
  361 GVWTGRLGGW AQVMFQFLSQ GFYCGVGLFT RFLKLLGALL LLALALFLGF LQLGWRFLVG 420
  421 LGDRLGWRDK ATWLFSWLDS PALQRCLTLL RDSRPWQRLV RIVQWGWLEV PWVKQNINRQ 480
  481 GNAPVASGRY CQPEEEVARL LTMAGVPEDE LNPFHVLGVE ATASDVELKK AYRQLAVMVH 540
  541 PDKNHHPRAE EAFKVLRAAW DIVSNAEKRK EYEMKRMAEN ELSRSVNEFL SKLQDDLKEA 600
  601 MNTMMCSRCQ GKHRRFEMDR EPKSARYCAE CNRLHPAEEG DFWAESSMLG LKITYFALMD 660
  661 GKVYDITEWA GCQRVGISPD THRVPYHISF GSRIPGTRGR QRATPDAPPA DLQDFLSRIF 720
  721 QVPPGQMPNG NFFAAPQPAP GAAAASKPNS TVPKGEAKPK RRKKLAELKQ ECLARGLETK 780
  781 GIKQDLIHRL QAYLEEHAEE EANEEDVLGD ETEEEETKPI ELPVKEEEPP EKTVDVAAEK 840
  841 KVVKITSEIP QTERMQKRAE RFNVPVSLES KKAARAARFG ISSVPTKGLS SDNKPMVNLD 900
  901 KLKERAQRFG LNVSSISRKS EDDEKLKKRK ERFGIVTSSA GTGTTEDTEA KKRKRAERFG 960
  961 IA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle