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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114644137
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKVRATRVY GLGLLQRLAA AWSGIARSIS FHLSLRGTVF FVMSGEKTGQ KYIQAEPPTN  60
   61 KSLSSLVVQL LQFQEEVFGK HVSNAPLTKL PIKCFLDFKA GGSLCHILAA AYKFKSDQGW 120
  121 RRYDFQNPSR MDRNVEMFMT IEKSLVQNNC LSRPNIFLCP EIEPKLLGKL KDIIKRHQGT 180
  181 VTEDKNNASH VVYPVPGNLE EEEWVRPVMK RDKQVLLHWG YYPDSYDTWI PASEIEASVE 240
  241 DAPTPEKPRK VHAKWILDTD TFNEWMNEED YEVNDDKNPV SRRKKISAKT LTDEVNSPDS 300
  301 DRRDKKGGNY KKRKRSPSPS PTPEAKKKNA KKGPSTPYTK SKRGHREEEQ EDLTKDMDEP 360
  361 SPVPNVEEVT LPKTVNTKKD SESAPVKGGT MTDLDEQEDE SMETTGKDED ENSTGNKGEQ 420
  421 TKNPDLHEDN VTEQTHHIII PSYAAWFDYN SVHAIERRAL PEFFNGKNKS KTPEIYLAYR 480
  481 NFMIDTYRLN PQEYLTSTAC RRNLAGDVCA IMRVHAFLEQ WGLINYQVDA ESRPTPMGPP 540
  541 PTSHFHVLAD TPSGLVPLQP KTPQGRQVDA DTKAGRKGKE LDDLVPETAK GKPELQTSAS 600
  601 QQMLNFPDKG KEKPTDMQNF GLRTDMYTKK NVPSKSKAAA SATREWTEQE TLLLLEALEM 660
  661 YKDDWNKVSE HVGSRTQDEC ILHFLRLPIE DPYLEDSEAS LGPLAYQPIP FSQSGNPVMS 720
  721 TVAFLASVVD PRVASAAAKS ALEEFSKMKE EVPTALVEAH VRKVEEAAKV TGKADPAFGL 780
  781 ESSGIAGTTS DEPERIEESG NDEARVEGQA TDEKKEPKEP REGGGAIEEE AKEKTSEAPK 840
  841 KDEEKGKEGD SEKESEKSDG DPIVDPEKEK EPKEGQEEVL KEVVESEGER KTKVERDIGE 900
  901 GNLSTAAAAA LAAAAVKAKH LAAVEERKIK SLVALLVETQ MKKLEIKLRH FEELETIMDR 960
  961 EREALEYQRQ QLLADRQAFH MEQLKYAEMR ARQQHFQQMH QQQQQPPPAL PPGSQPIPPT1020
 1021 GAAGPPAVHG LAVAPASVVP APAGSGAPPG SLGPSEQIGQ AGSTAGPQQQ QPAGAPQPGA1080
 1081 VPPGVPPPGP HGPSPFPNQQ TPPSMMPGAV PGSGHPGVAA QSPAIVAAVQ GNLLPSASPL1140
 1141 PDPGTPLPPD PTAPSPGTVT PVPPPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle