YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114643566
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETSGLRLS EPLPTASTSP QQRHAGGGAP SPPSKRSAAS PADHEVGATG EGRAGGSSPP  60
   61 RLPASCRRPS RSSGPGPGFP GEEREGGRGL GAAANPPAQR RAPNPRPRPR FPAVWLVYSP 120
  121 CQSFSSSSAS LPPPYWATKK RGLVFSGCFS PPPLSPLAHG SATPTPARFG ERLGSRDPRA 180
  181 CTRPDLDGLC HPLRLPGPLP SPPSRSPVHL ISGDSAAGPG LPRSPCALLE LGPWLVGVCV 240
  241 FWLRGQSLGF REGFGLRRGA LFCSVLFCFV FLRVRERRSC RPGRKMSNVR VSNGSPSLER 300
  301 MDARQAEHPK PSACRNLFGP VDHEELTRDL EKHCRDMEEA SQRKWNFDFQ NHKPLEGKYE 360
  361 WQEVEKGSLP EFYYRPPRPP KGACKVPAQE SQDVSGSRPA APLIGAPANS EDTHLVDPKT 420
  421 DPSDSQTGLA EQCAGIRKRP ATDDTSLLDE ARKIYMKILK IHIADFMDIL YKH

Type	Start	End	Confidence
Cytoplasmic	1	225	0.66
Transmembrane Helix	226	245	0.68
Non-Cytoplasmic	246	253	0.71
Transmembrane Helix	254	274	0.87
Cytoplasmic	275	473	0.75