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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114643031
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMARGSLTR VPGVMGGGTQ GPELSLDPDP CSPQSTPGLM KGNKLEEQGP RPLQPTPGLM  60
   61 EGNKLEEQDS SPPQSTPGLM KGDKREEQGL GPEPAAPQQP TAEEEALIEF HRSYRELFEF 120
  121 FCNNTTIHGA IRLVCSQHNR MKTAFWAVLW LCTFGMMYWQ FGLLFGEYFS YPVSLNINLN 180
  181 SDKLVFPAVT ICTLNPYRYP EIKEELEELD RITEQTLFDL YKYSSFTTLV AGSRSRRDLR 240
  241 GTLPHPLQRL RVPPPPHGAR RARSVASSVR DNNPQVDWKD WKIGFQLCNQ NKSDCFYQTY 300
  301 SSGVDAVREW YRFHYINILS RLPETLPSLE KDTLGNFIFA CRFNQVSCNQ ANYSHFHHPM 360
  361 YGNCYTFNDK NNSNLWMSSM PGINNGLSLM LRAEQNDFIP LLSTVTGARV MVHGQDEPAF 420
  421 MDDGGFNLRP GVETSISMRK ETLDRLGGDY GDCTKNGSDV PVENLYPSKY TQQVCIHSCF 480
  481 QESMIKECGC AYIFYPRPQN VEYCDYRKHS SWGWSYGNLC LTFFEELPGC FPKCRLECSG 540
  541 TILANYSLHL LGSSDYPASA SQRRSFTMLA RMXXYPVNNK RNGVAKVNIF FKELNYKTNS 600
  601 ESPSVTMVTL LSNLGSQWSL WFGSSVLSVV EMAELIFDLL VITFLMLLRR FRSRYWSPGR 660
  661 GGRGAQEVAS TLASSPPSHF CPHPTSLSLS QPGPAPSPAL TAPPPAYATL GPRPSPGGST 720
  721 GAGSSACPLG GP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle