YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114641111
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRFFLLMSL YLLGSARGTS GQPDELSGSI DHQTSVQQLP GEFFSLENPS DAEALYETSS  60
   61 GLNTLSEHGS SEHGSSEHTV AEHTSGEHAE SEHASGEPAA TEHAEGEHTV GEQPSGEQPS 120
  121 GEHLSGEQPL SKLESGEQPS DEQPSGEHAS GEQPSGEQAS GEQPSGTILN CYTCAYMNDQ 180
  181 GKCLRGEGTC ITQNSQQCML KKIFEGGKLQ FMVQGCENMC PTMNLFSHGT RMQIICCRNQ 240
  241 SFCNKI

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	246	0.99