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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114640164
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKRVMIIAD MGISITYISL HCLLLYFLCS EEEGNRLNPA VPHFNRPPGS HLQSSAETNF  60
   61 SLDQNLQGTW IAWAFIREST TAYTEQLRKQ TYINMTLRKC SSPGLAIAKQ HLGRFIAPNK 120
  121 QPALAQLLAG SLGSRRGRCC ALGIVPLLGL RREGFRPRSS PTCNCSLRSL HPSLPASRGL 180
  181 VAIGLHRCPV NSSATAFSER RWLSWGRAGR AVGGPVCVAT SRPLRTDAGK KGVGPRLRPR 240
  241 HQARDSGEVR FQCMVFPAKR FCLVPSMEGV RWAFSCGTWL PSRAEWLLAV RSIQPEEKER 300
  301 IGQFVFARDA KAAMAGRLMI RKLVAEKLNI PWNHIRLQRT AKGKPVLAKD SSNPYPNFNF 360
  361 NISHQGDYAV LAAEPELQVG IDIMKTSFPG RGSIPEFFHI MKRKFTNKEW ETIRSFKDEW 420
  421 TQLDMFYRNW ALKESFIKAI GVGLGFELQR LEFDLSPLNL DIGQVYKETR LFLDGEEEKE 480
  481 WAFEESKIDE HHFVAVALRK PDGSRHQDVP SQDDSKPTQR QFTILNFNDL MSSAVPMTPE 540
  541 DPSFWDCFCF TEEIPIRNGT KS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle