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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114639409
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSYKNDPPT NLSSALAQED GSDQVPAHQG AFPQCAGGIR PNARLQCIPR PRACYSVQRE  60
   61 FQTVFHRALE IGCVGWASVC FFPQNAPKEQ ELYPQHPAQG WGVSGKVGQI EGQMRNECTG 120
  121 SSLCNIPSPT LTPPPNSCRE KALRELSDKV LRSGTPAPGL PPLLGSRLFL SRHHWPPAAA 180
  181 PGVLAAQPPR RPGTPVLCAK PWPRGPGHGP GARGEAASRG AVTGRASAMK TLIAAYSGVL 240
  241 RGERQAEADR SQRSHGGPAL SREGSGRWGT GSSILSALQD LFSVTWLNRS KVEKQLQVIS 300
  301 VLQWVLSFLV LGVACSAILM YIFCTDCWLI AVLYFTWLVF DWNTPKKGGR RSQWVRNWAV 360
  361 WRYFRDYFPI QLVKTHNLLT TRNYIFGYHP HGIMGLGAFC NFSTEATEVS KKFPGIRPYL 420
  421 ATLAGNFRMP VLREYLMSGG ICPVSRDTID YLLSKNGSGN AIIIVVGGAA ESLSSMPGKN 480
  481 AVTLRNRKGF VKLALRHGAD LVPIYSFGEN EVYKQVIFEE GSWGRWVQKK FQKYIGFAPC 540
  541 IFHGRGLFSS DTWGLVPYSK PITTVVGEPI TIPKLEHPTQ QDIDLYHTMY MEALVKLFDK 600
  601 HKTKFGLPET EVLEVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle