YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114639718
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAGPALLLA ALLLLLSGDR AVRCDTPANC TYLDLLGTWV FQVGSSGSQR DVNCSVMGPQ  60
   61 EKKVVVYLQK LDTAYDDLGN SGHFTIIYNQ GFEIVLNDYK WFAFFKYKEE GSKVTTYCNE 120
  121 TMTGWVHDVL GRNWACFTGK KVGTASENVY VNTAHLKNSQ EKPKPAPLTA EIQQKLLHLP 180
  181 TSWDWRNVHG INFVSPVRNQ ASCGSCYSFA SMGMLEARIR ILTNNSQTPI LSPQEVVSCS 240
  241 QYAQGCEGGF PYLIAGKYAQ DFGLVEEACF PYTGTDSPCK MKEDCFRYYS SEYHYVGGFY 300
  301 GGCNEALMKL ELVHHGPMAV AFEVYDDFLH YKKGIYHHTG LRDPFNPFEL TNHAVLLVGY 360
  361 GTDSASGMDY WIVKNSWGTG WGEDGYFRIR RGTDECAIES IAVAATPIPK L

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	411	0.99