YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114638772
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPVTAGLSS CAGWSAGSRP GKNVQLTENE IRGLCLKSRE IFLSQPILLE LEAPLKICGD  60
   61 IHGQYYDLLR LFEYGGFPPE SNYLFLGDYV DRGKQSLETI CLLLAYKIKY PENFFLLRGN 120
  121 HECASINRIY GFYDECKRRY NIKLWKTFTD CFNCLPIAAI VDEKIFCCHG GLSPDLQSME 180
  181 QIRRIMRPTD VPDQGLLCDL LWSDPDKDVQ GWGENDRGVS FTFGAEVVAK FLHKHDLDLI 240
  241 CRAHQVVEDG YEFFAKRQLV TLFSAPNYCG EFDNAGAMMS VDETLMCSFQ ILKPADKNKG 300
  301 KYGQFSGLNP GGRPITPPRN SAKAKK

Type	Start	End	Confidence
Signal Peptide	1	17	0.87
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	326	0.99