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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114637909
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGSSDTHFP WSRHWGEEDL PPAPDQVPSS AEPPAMPGIV VFRRRWSVGS DDLVLPAIFL  60
   61 FLLHTTWFVI LSVVLFGLVY NPHEACSLNL VDHGRGYLGI LLSCMIAEMA IIWLSMRGGI 120
  121 LYTEPRDSMQ YVLYVRLAIL VIEFIYAIVG IVWLTQYYTS CNDLTAKNVT LGMVVCNWVV 180
  181 ILSVCITVLC VFDPTGRTFV KLRATKRRQR NLRTYNLRHR LEEGQATSWS RRLKVFLCCT 240
  241 RTKDSQSDAY SEIAYLFAEF FRDLDIVPSD IIAGLVLLRQ RQRAKRNAVL DEANNDILAF 300
  301 LSGMPVTRNT KYLDLKNSQE MLRYKEVCYY MLFALAAYGW PMYLMRKPAC GLCQLARSCS 360
  361 CCLCPARPRF APGVTIEEDN CCGCNAIAIR RHFLDENMTA VDIVYTSCHD AVYETPFYVA 420
  421 VDHDKKKVVI SIRGTLSPKD ALTDLTGDAE RLPVEGHHGT WLGHKGMVLS AEYIKKKLEQ 480
  481 EMVLSQAFGR DLGRGTKHYG LIVVGHSLGA LKSALSRDPT PLPTLSCPVV RSPGERTPIP 540
  541 LIAADQAWLT ALSRSLPRIG LSQLEGFRRQ LLDVLQRSTK PKWRIIVGAT KCIPKSELPE 600
  601 EVEVTTLAST RLWTHPSDLT IALSASTPLY PPGRIIHVVH NHPAEQCCCC EQEEPTYFAI 660
  661 WGDNKAFNEV IISPAMLHEH LPYVVMEGLN KVLENYNKGK TALLSAAKVM VSPTEVDLTP 720
  721 ELIFQQQPLP TGPPMPTGLA LELPTADHRN SSVRSKSQSE MSLEGFSEGR LLSPVVAAAA 780
  781 RQDPVELLLL STQERLAAEL QARRAPLATM ESLSDTESLY SFDSRRSSGF RSIRGSPSLH 840
  841 AVLERDEGHL FYIDPAIPEE NPSLSSRTEL LAADSLSKHS QDTQPLEAAL GSGGVTPERP 900
  901 PSAAANDEEE EVGGGGGGLA SRGELALHNG RLGDSPSPQV LEFAEFIDSL FNLDSKSSSF 960
  961 QDLYCMVVPE SPTSDYAEGP KSPSQQEILL RAQFEPNLVP KPPRLFAGSA DPSSGISLSP1020
 1021 SFPLSSSGEL MDLTPTGLSS QECLAADKIR TSTPTGHGAS PAKQDELVIS AR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle