YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114638047
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSQWFSPT TARPNQTRGA GGVPPSRRRW SSALLVAASA ELGLRRLSVF PVDSQGLSEI  60
   61 SLEHEILLHP RYFGPNLLNT VKQKLFTEVE GTCTGKYGFV IAVTTIDNIG AGVIQPGRGF 120
  121 VLYPVKYKAI VFRPFKGEVV DAVVTQVNKV GLFTEIGPMS CFISRHSIPS EMEFDPNSNP 180
  181 PCYKTMDEDI VIQQDDEIRL KIVGTRVDKN DIFAIGSLMD DYLGLVS

Type	Start	End	Confidence
Signal Peptide	1	40	0.80
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	227	0.99