YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114637722, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTESNRRAN LALPQEPSSV PAFEVLEISP QEVSSGRLLK SASSPPQHTW LRVLKKEQEF  60
   61 LGVTQILTAM ICLCFGTVVC SVLDISHIEG DIFSSFKAGY PFWGAIFFSI SGILSIISER 120
  121 RNATYLVRGS LGANTASSIA GGMGITILII NLKKSLAYIH IHSCQKLFET KCFMASFSTE 180
  181 IVVMMLFLTI LGLGSAVSLT IYGAGEELKG NKVPEDRVYE ELNIYSATYS ELEDPGEMSP 240
  241 PIDL

Type	Start	End	Confidence
Cytoplasmic	1	60	0.98
Transmembrane Helix	61	85	0.87
Non-Cytoplasmic	86	98	0.85
Transmembrane Helix	99	118	0.94
Cytoplasmic	119	129	0.81
Transmembrane Helix	130	150	0.93
Non-Cytoplasmic	151	182	0.89
Transmembrane Helix	183	203	0.94
Cytoplasmic	204	244	0.95