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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114638033
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVAAVAAR RRRYWASLVL AFLGVCLGIT FAVDRSNFKT CEESSFCKRQ RSIRPGLSPY  60
   61 RALLDSLQLG PDSLTVHLIH EVTKVLLVLE LQGLQKNMTR FRIDELEPRR PRYRVPDVLV 120
  121 ADPPIARLSV SGRDENSVEL TMAEGPYKII LTARPFRLDL LEDRSLLLSV NARGLLEFEH 180
  181 QRAPRVSQGS KDPAEGNGAQ PEETPRDGDK AKETQGKAET DEPGAWEETF KTHSDSKPYG 240
  241 PMSVGLDFSL PGMEHVYGIP EHADNLRLKV TEGGEPYRLY NLDVFQYELY NPMALYGSVP 300
  301 VLLAHNPHRD LGIFWLNAAE TWVDISSNTA GKVRTQARGK RREKTKISRT DVRWMSETGI 360
  361 IDVFLLLGPS ISDVFRQYAS LTGTQALPPL FSLGYHQSRW NYRDEADVLE VDQGFDDHNL 420
  421 PCDVIWLDIE HADGKRYFTW DPSRFPQPRT MLERLASKRR KLVAIVDPHI KVDSGYRVHE 480
  481 ELRNLGLYVK TRDGSDYEGW CWPGSAGYPD FTNPTMRAWW ANMFSYDNYE GSAPNLFVWN 540
  541 DMNEPSVFNG PEVTMLKDAQ HYGGWEHRDV HNIYGLYVHM ATADGLRQRS GGMERPFVLA 600
  601 RAFFAGSQRF GAVWTGDNTA EWDHLKISIP MCLSLGLVGL SFCGADVGGF FKNPEPELLV 660
  661 RWYQMGAYQP FFRAHAHLDT GRREPWLLPS QHNDIIRDAL GQRYSLLPFW YTLLYQAHRE 720
  721 GIPVMRPLWV QYPQDVTTFN IDDQYLLGDA LLVHPVSDSG AHGVQVYLPG QGEVWYDIQS 780
  781 YQKHHGPQTL YLPVTLSSIP VFQRGGTIVP RWMRVRRSSE CMKDDPITLF VALSPQGTAQ 840
  841 GELFLDDGHT FNYQTRQEFL LRRFSFSGNT LVSSSADPEG HFETPIWIER VVIIGAGKPA 900
  901 AVVLQTKGSP ESRLSFQHDP ETSVLVLRKP GINVASDWSI HLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle