YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114636912
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLWLMAIWM LPKPRSRKQL QTTAGPHSPI ARPWGTQGTS KTHRNQIRGG RPKLSVPWGF  60
   61 EGAHWVLATR PSQNLGQEAE LRAGVEGEEE GPAEARLRGA GPGAEPCGLE RKTAGAERRS 120
  121 GSRLEEDPGR RQSLAPVGVG VETYFTVVLW TITMGIQGGS VLFGLLLVLA VFCHSGHSLQ 180
  181 CYNCPNPTAD CKTAVNCSSD FDACLITKAG LQVYNKCWKL EHCNFKDLTT RLRENELTYY 240
  241 CCKKDLCNFN EQLENDTFLK ALKDEKLQGL KTKQPGKKSA SLS

Type	Start	End	Confidence
Cytoplasmic	1	146	0.57
Transmembrane Helix	147	172	0.62
Non-Cytoplasmic	173	283	0.59