YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114631084
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSWGVLAVR RRGALSLSVG AACGLVALWQ RRLQDSGTMN GFSTEERAAP FSLEYRVFLK  60
   61 NEKGQYISPF HDIPIYADKD VFHMVVEVPR WSNAKMEIAT KDPLNPIKQD VKKGKLRYVA 120
  121 NLFPYKGYIW NYGAIPQTWE DPGHNDKHTG CCGDNDPIDV CEIGSKVCAR GEIIGVKVLG 180
  181 ILAMIDEGET DWKVIAINVD DPDAANYNDI NDVKRLKPGY LEATVDWFRR YKVPDGKPEN 240
  241 EFAFNAEFKD KDFAIDIIKS THDHWKALVT KKTNGKGISC MNTTVSESPF KCDPDAARAI 300
  301 VDALPPPCES ACTVPTDVDK WFHHQKN

Type	Start	End	Confidence
Signal Peptide	1	27	0.74
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	327	0.98