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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114631271
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQISGAVAPA PPSSGLGFGP PTSLASASGS FPNSGLYGSY PQGQAPPLSQ AQGHPGIQTP  60
   61 QRSAPSQASS FTPPASGGPR LPSMTGPLLP GQSFGGPAVS QPNHVSSPPQ ALPPGTQMTG 120
  121 PLGPLPPMHS PQQPGYQPQQ NGSFGPARGP QSNYGSPYPA APTFGSQPGP PQPLPPKRLD 180
  181 PDAIPSPIQV IEDDRNNRGT EPFVTGVRGQ VPPLVTTNFL VKDQGNASPR YIRCTSYNIP 240
  241 CTSDMAKQAQ VPLAAVIKPL ARLPPEEASP YVVDHGESGP LRCNRCKAYM CPFMQFIEGG 300
  301 RRFQCCFCSC INDVPPQYFQ HLDHTGKRVD AYDRPELSLG SYEFLATVDY CKNNKFPSPP 360
  361 AFIFMIDVSY NAIRTGLVRL LCEELKSLLD FLPREGGAEE SAIRVGFVTY NKVLHFYNVK 420
  421 SSLAQPQMMV VSDVADMFVP LLDGFLVNVN ESRAVITSLL DQIPEMFADT RETETVFVPV 480
  481 IQAGMEALKA AECAGKLFLF HTSLPIAEAP GKLKNRDDRK LINTDKEKTL FQPQTGAYQT 540
  541 LAKECVAQGC CVDLFLFPNQ YVDVATLSVV PQLTGGSVYK YASFQVENDQ ERFLSDLRRD 600
  601 VQKVVGFDAV MRVRTSTGIR AVDFFGAFYM SNTTDVELAG LDGDKTVTVE FKHDDRLNEE 660
  661 SGALLQCALL YTSCAGQRRL RIHNLALNCC TQLADLYRNC ETDTLINYMA KFAYRGVLNS 720
  721 PVKAVRDTLI TQCAQILACY RKNCASPSSA GQLILPECMK LLPVYLNCVL KSDVLQPGAE 780
  781 VTTDDRAYVR QLVTSMDVAE TNVFFYPRLL PLTKSPVEST TEPPAVRASE ERLSNGDIYL 840
  841 LENGLNLFLW VGASVQQGVV QSLFSVSSFS QITSGLSVLP VLDNPLSKKV RGLIDSLRAQ 900
  901 RSRYMKLTVV KQEDKLEMLF KHFLVEDKSL SGGASYVDFL CHMHKEIRQL LS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle