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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114630183
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDLPGSKRD ISGQTGARVE RAAPRKRNLK NTGPAGYTRN ARGSRSRRKS ARRHPPRVPG  60
   61 AGSPRAQSQP SRVPNAKVAG LGAVTSGLPE LRGTGPERPL TPAVSRRAGQ AQMNLRPIFW 120
  121 IGLISSVCCV FAQTDENRCL KANAKSCGEC IQAGPNCGWC TNSTFLQEGM PTSARCDDLE 180
  181 ALKKKGCPLD DIENPRGSKD IKKNKNVTNR SKGTAEKLKP EDITQIQPQQ LVLRLRSGEP 240
  241 QTFTLKFKRA EDYPIDLYYL MDLSYSMKDD LENVKSLGTD LMNEMRRITS DFRIGFGSFV 300
  301 EKTVMPYIST TPAKLRNPCT SEQNCTSPFS YKNVLSLTNK GEIFNELVGK QRISGNLDSP 360
  361 EGGFDAIMQV AVCGSLIGWR NVTRLLVFST DAGFHFAGDG KLGGIVLPND GQCHLENNMY 420
  421 TMSHYYDYPS IAHLVQKLSE NNIQTIFAVT EEFQPVYKEL KNLIPKSAVG TLSANSSNVI 480
  481 QLIIDAYNSL SSEVILENGK LSEGVTISYK SYCKNGVNGT GENGRKCSNI SIGDEVQFEI 540
  541 SITSNKCPKK DSDSFKIRPL GFTEEVEVIL QYICECECQS EGIPESPKCH EGNGTFECGA 600
  601 CRCNEGRVGR HCECSTDEVN SEDMDAYCRK ENSSEICSNN GECVCGQCVC RKRDNTNEIY 660
  661 SGKFCECDNF NCDRSNGLIC GGNGVCKCRV CECNPNYTGS ACDCSLDTST CEASNGQICN 720
  721 GRGICECGVC KCTDPKFQGQ TCEMCQTCLG VCAEHKECVQ CRAFNKGEKK DTCTQECSYF 780
  781 NITKVESRDK LPQPVQPDPV SHCKEKDVDD CWFYFTYSVN GNNEVMVHVV ENPECPTGPD 840
  841 IIPIVAGVVA GIVLIGLALL LIWKLLMIIH DRREFAKFEK EKMNAKWDTG ENPIYKSAVT 900
  901 TVVNPKYEGK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle