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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114627561
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVITPVRTKI SSSAMCPSPQ AVVSCAPTLP KTLVTNTVLL VFLTDSPPSE DLDPADPPIS  60
   61 EEERWGEASN DEDDPKDKTL PEDPETCLQL NMVYQEVIQE KLAEANLLLA QNREQQEELM 120
  121 RDLAGSKGTK VKDGKSLPPS TYMGHFMKPY FKDKVTGVGP PANEDTREKA AQGIKAFEEL 180
  181 LVTKWKNWEK ALLRKSVVSD RLQRLLQPKL LKLEYLHQKQ SKVSSELERQ ALEKQGREAE 240
  241 KEIQDINQLP EEALLGNRLD SHDWEKISNI NFEGSRSAEE IRKFWQNSEH PSINKQEWSR 300
  301 EEEERLQAIA AAHGHLEWQK IAEELGTSRS AFQCLQKFQQ HNKALKRKEW TEEEDRMLTQ 360
  361 LVQEMRVGSH IPYRRIVYYM EGRDSMQLIY RWTKSLDPGL KKGYWAPEED AKLLQAVAKY 420
  421 GEQDWFKIRE EVPGRSDAQC RDRYLRRLHF SLKKGRWNLK EEEQLIELIE KYGVGHWAKI 480
  481 ASELPHRSGS QCLSKWKIMM GKKQGLRRRR RRARHSVRWS SSSSSSSGSG SSGGGSSSSS 540
  541 SSSSEEDEPE PEQAQAGEGD RALLSPQYMV PDMDLWVPAR QSTSQPWRGG AGAWLGGPAA 600
  601 SLSPPKGSSA SQGGSKEAST TAAAPGEETS PVQVPARAHG PVPRAAQASH SADTRLAGAE 660
  661 KQALEGGRRL LTVPVETVLR VLRANTAARS CTQKEQLRQP PLPTSSPGVS SGDSVARSHV 720
  721 QWLRHRATQS GQRRWRHALH RRLLNRRLLL AVTPWVGDVV VPCTQASQRP AIVQTHADGL 780
  781 REQLQQARLA STPVFTLFTQ GFQIDTAGCW RSVRLGQLGA PWAPLAALRL PQHGARGRGR 840
  841 LERASAHAQR RPGHLFPNVP AQEASKSASH KGSRRLASSR VERTLPQASP LAPTGPRPKP 900
  901 KTVSELLQEK RLQEARAREA TRGPVVLPSQ LLVSSPVILQ PPLPHTPHGR PAPGPTVLNV 960
  961 PLSGPGAPAA AKPGTSGSWQ EAGTSAKDKR LSTMQALPLA PAFTEAEGTA PAASQAPALG1020
 1021 PGQISVSCPE SGLGQSQAPA ASRKQGLPEA PPFLPAAPSP TLLPVQPLSL THIGGPHVAT1080
 1081 SIPLPVTWVL TAQGLLPVPV PAVVSLPRPA GTSGPAGLLA TLLVPTCSSR EAGLPEKPPE1140
 1141 AGSLSWTCGP VGAPDSGKCC ASSCLDASND PDDLDVLRTR HARHTRKRRR LV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle