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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114627460
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLGLEVTGP SLCLPLRGGG KQTCSSHFLP LPPTLTTFSF PQTLTRRGPC HVLIPVPASA  60
   61 ALLPPLGGQG KQYFRRWGLE GAALCLPWVL AFRGIHLWYK AFAPGLQVDG PGVLRVGATQ 120
  121 AGILGLIHSG FVCVCHRPSL KPGGQAQNNF SAQVNSSLTS PTGRGSMAAP SLHPSLGPGI 180
  181 GSPGQLHSPI STLSSPINGM GPPFSVISSP MGPHSMSVPT TPTLGFSTGS PQLSSPMNPV 240
  241 SSSEDIKPPL GLNGVLKVPA HPSGNMASFT KHICAICGDR SSGKHYGVYS CEGCKGFFKR 300
  301 TVRKDLTYTC RDNKDCLIDK RQRNRCQYCR YQKCLAMGMK REAVQEERQR GKDRNENEVE 360
  361 STSSANEDMP VERILEAELA VEPKTETYVE ANMGLNPSSP NDPVTNICQA ADKQLFTLVE 420
  421 WAKRIPHFSE LPLDDQVILL RAGWNELLIA SFSHRSIAVK DGILLATGLH VHRNSAHSAG 480
  481 VGAIFDRVLT ELVSKMRDMQ MDKTELGCLR AIVLFNPDSK GLSNPAEVEA LREKVYASLE 540
  541 AYCKHKYPEQ PGRFAKLLLR LPALRSIGLK CLEHLFFFKL IGDTPIDTFL MEMLEAPHQM 600
  601 T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle