YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114626320
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLGALLLL LSACLAVSAG PVPTPPDNIQ VQENFNISRV XGKWYXXAIG STCPWLKKIM  60
   61 DRMTVSTLVL GEGATEAEIS MTSTRWRKGV CEETSGAYEK TDTDGKFLYH KSKWNITMES 120
  121 YVVHTNYDEY AIFLTKKFSR RHGPTITAKL YGRAPQLRET LLQDFRVVAQ GVGIPEDSIF 180
  181 TMADRGECVP GEQEPEPILI PRVRRAVLPQ EEEGSGGGQL VTEVTKKEDS CQLGYSAGPC 240
  241 MGMTSRYFYN GTSMACETFQ YGGCMGNGNN FVTEKECLQT CRTVAACNLP IVRGPCRAFI 300
  301 QLWAFDAVKG KCILFTYGGC QGNGNKFYSE KECREYCGVP GDGDEELLRF SN

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	352	0.99