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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114625872
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASRQAGSR TLASGPAFPY QGAARAAPPS AQAPPRMPSL AQPLLPLFPR RQKPETSSRR  60
   61 LSQRLAHPAA SSALPGQWRA SAPACRSIRA PCSCPCVGQR PDSSCSAYRL ASRFRGAPEG 120
  121 SMSRRRHSDE NDGGQPHKRR KTSDANETED HLESLICKVG EKSACSLESN LEGLAGVLEA 180
  181 DLPNYKSKIL RLLCTVARLL PEKLTIYTTL VGLLNARNYN FGGEFVEAMI RQLKESLKAN 240
  241 NYNEAVYLVR FLSDLVNCHV IAAPSMVAMF ENFVSVTQEE DVPQVRRDWY VYAFLSSLPW 300
  301 VGKELYEKKD AEMDRIFANT ESYLKRRQKT HVPMLQVWTA DKPHPQEEYL DCLWAQIQKL 360
  361 KKDRWQERHI LRPYLAFDSI LCEALQHNLP PFTPPPHTED SVYPMPRVIF RMFDYTDDPE 420
  421 GPVMPGSHSV ERFVIEENLH CIIKSHWKER KTCAAQLVSY PGKNKIPLNY HIVEVIFAEL 480
  481 FQLPAPPHID VMYTTLLIEL CKLQPGSLPQ VLAQATEMLY MRLDTMNTTC VDRFINWFSH 540
  541 HLSNFQFRWS WEDWSDCLSQ DPESPKPKFV REVLEKCMRL SYHQRILDIV PPTFSALCPA 600
  601 NPTCIYKYGD ESSNSLPGHS VALCLAVAFK SKATNDEIFS ILKDVPNPNQ DDDDDEGFSF 660
  661 NPLKIEVFVQ TLLHLAAKSF SHSFSALAKF HEVFKTLAES DEGKLHVLRV MFEVWRNHPQ 720
  721 MIAVLVDKMI RTQIVDCAAV ANWIFSSELS RDFTRLFVWE ILHSTIRKMN KHVLKIQKEL 780
  781 EEAKEKLARQ HKRRSDDDDR SSDRKDGVLE EQIERLQEKV ESAQSEQKNL FLVIFQRFIM 840
  841 ILTEHLVRCE TDGTSVLTPW YKNCIERLQQ IFLQHHQIIQ QYMVTLENLL FTAELDPHIL 900
  901 AVFQQFCALQ A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle