YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114625610
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEQEGAGLR APGGAEADDV GGRGSRGGAR QRAGFRVPEA TQPKPGGWPS QKGRASTARG  60
   61 RRSLELVDRA ADRGADARRG RPLGTAGGAV SVAMTDQTYC DRLVQDTPFL TGHGRLSEQQ 120
  121 VDRIILQLNR YYPQILTNKE AEKFRNPKAS LRVRLCDLLS HLQRSGERDC QEFYRALYIH 180
  181 AQPLHSCLPS RHALQNSDCT ELDSGSQSGE LSNRGPMSFL AGLGLAVGLA LLLYCYPPDP 240
  241 KGLPGTRRVL GFSPVIINRH VSRYLLAFLA DDLGGL

Type	Start	End	Confidence
Non-Cytoplasmic	1	215	0.77
Transmembrane Helix	216	237	0.85
Cytoplasmic	238	276	0.60