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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114625255
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKYTEKKLQ LPRPRTSPPS PACCFALSLG LARRGGAREG RGGPADVAGP ELRRRGARSR  60
   61 ERARGNSSRQ FARERGAWVV GRLGAWAAGR WERKSLWDAE ETRMATPSKK TSTPSPQPSK 120
  121 RALPRDPSSE VPSKRKNSAP QLPLLQSSGP FVEGSIVRIS MENFLTYDIC EVSPGPHLNM 180
  181 IVGANGTGKS SIVCAICLGL AGKPAFMGRA DKVGFFVKRG CSRGMVEIEL FRASGNLVIT 240
  241 REIDVAKNQS FWFINKKSTT QKIVEEKVAA LNIQVGNLCQ FLPQDKVGEF AKLSKIELLE 300
  301 ATEKSIGPPE MHKYHCELKN FREKEKQLET SCKEKTEYLQ KMVQRNERYK QDVERFYERK 360
  361 RHLDLIEMLE AKRPWVEYEN VRQEYEEVKL VRDRVKEEVR KLKEGQIPIT RRIEEMENER 420
  421 HNLEARIKEK ATDIKEASQK CKQKQDVIER KDKHIEELQQ ALIVKQNEEL DRQRRIGNTR 480
  481 KMIEDLQNEL KTTENCENLQ PQIDAITNDL RRIQDEKALC EGEIIDKRRE RETLEKEKKS 540
  541 VDDHIVRFDN LMNQKEDKLR QRFRDTYDAV LWLRNNRDKF KQRVCEPIML TINMKDNKNA 600
  601 KYIENHIPSN DLRAFVFESQ EDMEVFLKEV RDNKKLRVNA VIAPKSSYAD KAPSRSLNEL 660
  661 KQYGFFSYLR ELFDAPDPVM SYLCCQYHIH EVPVGTEKTR ERIERVIQET RLKQIYTAEE 720
  721 KYVVKTSFYS NKVISSNTSL KVAQFLTVTV DLEQRRHLEE QLKEIHRKLQ TVDSGLIALR 780
  781 ETSKHLEHKD NELRQKKKEL LERKTKKRQL EQKISSKLGS LKLMEQDSCN LEEEERKAST 840
  841 KIKEINVQKA KLVTELTNLI KICTSLHIQK VDLILQNTTV ISEKNKLESD YMAASSQLRL 900
  901 TEQHFIELDE NRQRLLQKCK ELMKRARQVC NLGAEQTLPQ EYQTQVPTIP NGHNSSLPMV 960
  961 FQDLPNTLDE IDALLTEERS RASCFTGLNP TIVQEYTKRE EEIEQLTEEL KGKKVELDQY1020
 1021 RENISQVKER WLNPLKELVE KINEKFSNFF SSMQCAGEVD LHTENEEDYD KYGIRIRVKF1080
 1081 RSSTQLHELT PHHQSGGERS VSTMLYLMAL QELNRCPFRV VDEINQGMDP INERRVFEMV1140
 1141 VNTACKENTS QYFFITPKLL QNLPYSEKMT VLFVYNGPHM LEPNRWNLKA FQRRRRRITF1200
 1201 TQPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle