YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114623478
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSATRRAWQ LHLLLHSLFP VQRMGNSASN IVSPQEALPG RKEQTPVAAK HHVNGNRTVE  60
   61 PFPEGTQMAV FGMGCFWGAE RKFWVLKGVY STQVGFAGGY TSNPTYKEVC SEKTGHAEVV 120
  121 RVVYQPEHIS FEELLKVFWE NHDPTQGMRQ GNDHGTQYRS AIYPTSAKQM EAALSSKENY 180
  181 QKVLSEHGFG PITTDIREGQ TFYYAEDYHQ QYLSKNPNGY CGLGGTGVSC PVGIKK

Type	Start	End	Confidence
Signal Peptide	1	27	0.87
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	236	0.99