YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114620484
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVLGTLWG GTEPNPVSAA WGLGPGVAKR EKKEVPAVPE TLKKKRRNFA ELKIKRLRKK  60
   61 FAQKMLRKAR RKLIYEKAKH YHREYRQMYR TEIRMARMAR KAGNFYVPAE PKLAFVIRIR 120
  121 GINGVSPKVR KVLQLLRLRQ IFNGTFVKLN KASINMLRIV EPYIAWGYPN LKSVNELIYK 180
  181 RGYGKINKKR IALTDNALIA RSLGKYGIIC MEDLIHEIYT VGKRFKEANN FLWPFKLSSP 240
  241 RGGMKKKTTH FVEGGDAGNR EDQINRLIRR MN

Type	Start	End	Confidence
Signal Peptide	1	19	0.91
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	272	0.99