YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114620768
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAVITVTGS FCRSFQLFSA LAQLPEGRVA PASRRPSGGL PAQPLCSGAG PNWQPGNALG  60
   61 CVSPVQDDLL IPRSAAFPVW VPERTALLTC PLGAAPGSSR EAPGIARPPN STAMSKLGKF 120
  121 FKGGGSSKSR AAPSPQEALV RLRETEEMLG KKQEYLENRI QREIALAKKH GTQNKRAALQ 180
  181 ALKRKKRFEK QLTQIDGTLS TIEFQREALE NSHTNTEVLR NMGFAAKAMK SVHENMDLNK 240
  241 IDDLMQEITE QQDIAQEISE AFSQRVGFGD DFDEDELMAE LEELEQEELN KKMTNIRLPN 300
  301 VPSSSLPAQP NRKPGMSSTA RRSRAASSRR AEEEDDDIKQ LAAWAT

Type	Start	End	Confidence
Signal Peptide	1	22	0.73
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	346	0.99