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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114620290
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPRLFCWTT LFLLAGWCLP GLPCPSRCLC FKSTVRCMHL MLDHIPQVPQ QTTVLDLRFN  60
   61 RIREIPGSAF KKLKNLNTLL LNNNHIRKIS RNAFEGLENL LYLYLYKNEI HALDKQTFKG 120
  121 LISLEHLYIH FNQLEMLQPE TFGDLLRLER LFLHNNKLSK IPAGSFSNLD SLKRLRLDSN 180
  181 ALVCDCDLMW LKELLQGFAQ HGHTQAAATC EYPRRLHGRA VASVTVEEFN CQSPRITFEP 240
  241 QDVEVPSGNT VYFTCRAEGN PKPEIIWIHN NHSLDLEDDT RLNVFDDGTL MIRNTRESDQ 300
  301 GVYQCMARNA AGEAKTQSAM LRYSSLPAKP SFVIQPQDTE VLIGTSTTLE CMATGDPHPH 360
  361 ITWTRDNGLE LDGSRHVATS SGLYLQNITQ RDHGRFTCHA NNSHGTVQAA ANIIVQAPPQ 420
  421 FTVTPKDQVV LEEHAVEWLC EADGNPPPVI VWTKTGGQLP VEGQHTVLSS GTLRIDRAAQ 480
  481 HDQGQYECQA ISSLGVKKVS VQLTVKPKAL AVFTQLPQDT SVEVGKNINI SCHAQGEPQP 540
  541 IITWNKEGVQ ITESGKFHVD DEGTLTIYDA GFPDQGRYEC VARNSFGLAV TNMFLTVTAI 600
  601 QGRQAGDDFV ESSILDAVQR VDSAINSTRR HLFSQKPHTS SDLLAQFHYP RDPLIVEMAR 660
  661 AGEIFEHTLQ LIRERVKQGL TVDLEDKEFR YNDLVSPRSL SLIANLSGCT ARRPLPNCSN 720
  721 RCFHAKYRAH DGTCNNLQQP TWGAALTAFA RLLQPAYQDG IRAPRGLGLP VGSRQPLPPP 780
  781 RLVATVWARA AAVTPDHSNT RMLMHWGWFL EHDLDHTVPA LSTARFSDGR PCSSVCTNDP 840
  841 PCFPMNTRHA DPRGTHAPCM LFARSSPACA SGRPSATVDS VYAREQINQQ TAYIDGSNVY 900
  901 GSSERESQAL RDPSVPRGLL RTGFPWPASG KPLLPFSTGP PTECARQEQD SPCFLAGDHR 960
  961 ANEHLALTAM HTLWFREHNR VATELSALNP HWEGNTVYQE ARKIVGAELQ HITYSHWLPK1020
 1021 VLGDPGTRML RGYRGYNPNV NAGIINSFAT AAFRFGHTLI NPILYRLNAT LGEISEGHLP1080
 1081 FHKALFSPSR IIKEGGIDPV LRGLFGVAAK WRAPSYLLSP ELTQRLFSAA YSAAVDSAAT1140
 1141 IIQRGRDHGI PPYADFRVFC NLTSVKNFED LQNEIKDSEI RQKLRKLYGS PGDIDLWPAL1200
 1201 MVEDLIPGTR VGPTLMCLFV TQFQRLRDGD RFWYENPGVF TPAQLTQLKQ ASLGRVLCDN1260
 1261 GDSIQQVQAD VFVKAEYPQD YLSCSEIPKV DLRVWQDCCA DCRSRGQFRA VTQESQKKRS1320
 1321 AQYSYPDDKD MELSHLRSRQ QDKIYVGEDA RNVTVLAKTK FSQDFSTFAA EIQETITALR1380
 1381 EQINKLEARL RQAGCTDVKG VPRKAEERWM KEDCTHCICE SGQVTCVVEI CPPAPCPSPE1440
 1441 LVKGTCCPVC RDRGMPSDSP EKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle