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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114619747, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSWKCLLFW AVLVTATLCT ARPSPTLPEQ DALPSSEDDD DDDDDSSSEE KETDNTKPNR  60
   61 MPVAPYWTSP EKMEKKLHAV PAAKTVKFKC PSSGTPNPTL RWLKNGKEFK PDHRIGGYKV 120
  121 RYATWSIIMD SVVPSDKGNY TCIVENEYGS INHTYQLDVV ERSPHRPILQ AGLPANKTVA 180
  181 LGSNVEFMCK VYSDPQPHIQ WLKHIEVNGS KIGPDNLPYV QILKTAGVNT TDKEMEVLHL 240
  241 RNVSFEDAGE YTCLAGNSIG LSHHSAWLTV LEALEERPAV MTSPLYLEII IYCTGAFLIS 300
  301 CMVGSVIVYK MKSGTKKSDF HSQMAVHKLA KSIPLRRQVS ADSSASMNSG VLLVRPSRLS 360
  361 SSGTPMLAGV SEYELPEDPR WELPRDRLVL GKPLGEGCFG QVVLAEAIGL DKDKPNRVTK 420
  421 VAVKMLKSDA TEKDLSDLIS EMEMMKMIGK HKNIINLLGA CTQDGPLYVI VEYASKGNLR 480
  481 EYLQARRPPG LEYCYNPSHN PEEQLSSKDL VSCAYQVARG MEYLASKKCI HRDLAARNVL 540
  541 VTEDNVMKIA DFGLARDIHH IDYYKKTTNG RLPVKWMAPE ALFDRIYTHQ SDVWSFGVLL 600
  601 WEIFTLGGSP YPGVPVEELF KLLKEGHRMD KPSNCTNELY MMMRDCWHAV PSQRPTFKQL 660
  661 VEDLDRIVAL TSNQEYLDLS MPLDQYSPSF PDTRSSTCSS GEDSVFSHEP LPEEPCLPRH 720
  721 PAQLANGGLK RR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle