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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114619267
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLTPSGLA KSKLLSSCYR LQRLSAFLFS LAPPSRGSSP QDLQRLRGAE AASERQVRAG  60
   61 TPRAAGWAAA EEPRTPGWGS GWGRGQPCAE DRAPLPGTGT RPDGWVEAAP GGGAALARGE 120
  121 VKARPVRLEG AASPGPCRSI SPLKVHVPNL PAERISNLAC PRGWLSGYFW SLMTKLGGRV 180
  181 QAAPSWWCCH KTSSALKVTQ KGACPSCKLK AETLCGNRLL PGVGVSWKGD DAGAGLEGAG 240
  241 AEQRRFLPVL VKRSGDGMKK RWLCLLECSG AIIACCSLKL LGSSNPPTSA SHTAGITGVY 300
  301 SVTMKLLHPA FQSCLLLTLL GLWRTTPEAH ASSPGAPAIS AASFLQDLIH RYGEGDSLTL 360
  361 QQLKALLNHL DVGVGRGNVT QHVQGHRNLS TCFSSGDLFT AHNFSEQSRI GSSELQEFCP 420
  421 TILQQLDSRA CTSENQENEE NEQTEEGRPS AVEVWGYGLL CVTIISLCSL LGASVVPFKK 480
  481 KTFYKRLLLY FIALAIGTLY SNALFQLIPE AFGFNPLEDY YVSKSAVVFG GFYLFFFTEK 540
  541 ILKILLKQKN EHHHGHSHYA SESLPSKKDQ EEGVMEKLQN GDLDHMIPQH CSSELDGKAP 600
  601 MVDEKVIVGS LSVQDLQASQ SACYWLKGVR YSDIGTLAWM ITLSDGLHNF IDGLAIGASF 660
  661 TVSVFQGIST SVAILCEEFP HELGDFVILL NAGMSIQQAL FFNFLSACCC YLGLAFGILA 720
  721 GSHFSANWIF ALAGGMFLYI SLADMFPEMN EVCQEDERKG SILIPFVIQN LGLLTGFTIM 780
  781 VVLTMYSGQI QIG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle