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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114618949
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGCIGLGEK ARGSHRASYP SLSALFTEAS ILGFGSFAVK AQVAWKAHSP SLRHPFRGTE  60
   61 KSRPLLPVPP PPSAPPTAWN GAVPGRGSRG RGGVACPRPS RLFFASAGVR GVALAARAMP 120
  121 GRSRVALVLL AAAVSCAVAQ HAPPWTEDCR KSTYPPSGPT YRGPVPWYTI NLDLPPYKRW 180
  181 HELMLDKAPM LKVIVNSLKN MINTFVPSGK IVQVVDEKLP GLLGNFPGPF EEEMKGIAAV 240
  241 TDIPLGEIIS FNIFYELFTI CTSIVAEDKK GHLIHGRNMD FGVFLGWNIN NDTWVITEQL 300
  301 KPLTVNLDFQ RNNKTVFKAS SFAGYVGMLT GFKPGLFSLS LNERFSINGG YLGILEWILG 360
  361 KKDAMWIGFL TRTVLENSTS YEEAKNLLTK TKILAPAYFI LGGNQSGEGC VITRDRKESL 420
  421 DVYELDAKQG RWYVVQTNYD RWKHPFFLDD RRTPAKMCLN RTSQENISFE TMYDVLSTKP 480
  481 VLNKLTVYTT LIDVTKGQFE TYLRDCPDPC IGW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle