YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114616687
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSALPGWGP AHLQRPLLGP AFRLGILRPA MTAHSFALPV IIFTTFWGLV GIAGPWFVPK  60
   61 GPNRGVIITM LVATAVCCYL FWLIAILAQL NPLFGPQLKN ETIWCPALGM TVAPLSLTTP 120
  121 SSGPSPTQLC LVTSSLLLAP RDPDPQGLPG SWKSSQSSQP ARALGSPGHS SGRGDVLLQY 180
  181 PHCSGVCPLS QGDAAGELVW VGSFPLQTGQ MPGLSPS

Type	Start	End	Confidence
Cytoplasmic	1	32	0.70
Transmembrane Helix	33	57	0.83
Non-Cytoplasmic	58	65	0.67
Transmembrane Helix	66	88	0.91
Cytoplasmic	89	101	0.69
Transmembrane Helix	102	119	0.47
Non-Cytoplasmic	120	217	0.63